visual.conf
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# -*- Mode: Text; tab-width: 8; indent-tabs-mode: nil; coding: utf-8; -*-
# vim:set ft=conf ts=2 sw=2 sts=2 autoindent: noet
[labels]
### Entity types
Gene | Gene | Gn | G
Entity | Entity | Ent | En | E
Increase | Increase | Incr
Decrease | Decrease | Decr
### Event types
GeneExpression | Gene expression | Expression | Expr
TranscriptionOfGene | Transcription | Trns
GeneticModification | Genetic modification | G. modification | G.mod
RegulationOfGeneExpression | Regulation | Reg
PositiveRegulationOfGeneExpression | Positive regulation | +Regulation | +Reg
NegativeRegulationOfGeneExpression | Negative regulation | -Regulation | -Reg
### Relation types
Equiv | Equiv | Eq
### Role types
Theme | Theme | Th
Cause | Cause | Ca
[drawing]
SPAN_DEFAULT fgColor:black, bgColor:lightgreen, borderColor:darken
ARC_DEFAULT color:black, dashArray:-
ATTRIBUTE_DEFAULT glyph:*
#Protein bgColor:deepskyblue
#Entity bgColor:lightskyblue
Equiv dashArray:3-3
Gene bgColor:#7fa2ff
PositiveRegulationOfGeneExpression bgColor:#e0ff00
RegulationOfGeneExpression bgColor:#ffff00
NegativeRegulationOfGeneExpression bgColor:#ffe000
# BioNLP ST event participant roles
Cause color:#007700