hybrid_tree_utils.py
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from collections import defaultdict
from itertools import chain
from .constants import (
EMPTY,
TOKENS,
LEMMAS,
UPPERCASE,
TAGS,
NONTERMINALS,
SPINES,
ANCHORS,
ANCHOR_HS,
HEADS,
DEPRELS,
NE_NONTERMINALS,
NE_SPINES,
NE_ANCHORS,
NE_ANCHOR_HS,
NE_HEADS,
)
class TreeNode(object):
def __init__(self, nid, category, is_head, from_index, to_index, head_index=None, attributes=None, children=None):
self.nid = nid
self.parent = None
self.category = category
self.is_head = is_head
self.from_index = from_index
self.to_index = to_index
self.head_index = head_index
#self.deprel = deprel
self.attributes = attributes if attributes is not None else {}
self.children = children if children is not None else []
for child in self.children:
child.parent = self
def add_child(self, child):
self.children.append(child)
child.parent = self
def get_yield(self):
if not self.children:
return [self]
return list(chain.from_iterable(child.get_yield() for child in self.children))
def is_continuous(self):
idx = [token.from_index for token in self.get_yield()]
return (idx == sorted(idx))
def get_root(self):
root = self
while root.parent is not None:
root = root.parent
return root
def get_head_child(self):
if tree.children:
heads = [child for child in tree.children if child.is_head]
assert(len(heads) == 1)
return heads[0]
return None
def get_head_token(self):
while tree.children:
tree = tree.get_head_child
return tree
def make_evalb_friendly(self, s):
return s.replace(' ', '_').replace('(', 'LPAR').replace(')', 'RPAR')
def to_brackets(self, features=[], mark_head=True, mark_head_terminals=False, morph_tags=False, dummy_pre=False):
if mark_head_terminals:
raise NotImplementedError
if not self.children:
cat = self.make_evalb_friendly(self.category[0])
if morph_tags:
cat = f'({self.category[2]} {cat})'
#if mark_head_terminals and self.is_head:
# cat = '*' + cat
if len(self.parent.children) == 1 or not dummy_pre:
return cat
else:
return f'(DUMMY_PRE {cat})'
else:
cat = '_'.join([self.category] + [self.attributes.get(f, EMPTY_VAL) for f in features])
if mark_head and self.is_head:
cat = '*' + cat
cat = self.make_evalb_friendly(cat)
return f'({cat} {" ".join(child.to_brackets(features=features, mark_head=mark_head, mark_head_terminals=mark_head_terminals, morph_tags=morph_tags, dummy_pre=dummy_pre) for child in self.children)})'
def pretty_print(self, tab='', features=[]):
print(f'{tab}[{self.nid}] {"*" if self.is_head else ""}{self.category}{[self.attributes.get(f, EMPTY_VAL) for f in features]}')
for child in self.children:
child.pretty_print(tab=tab + ' ', features=features)
def make_lemma(token, case, rule):
cut_prefix, cut, suffix = rule.split('_', maxsplit=2)
cut_prefix, cut = int(cut_prefix), int(cut)
lemma = token.lower()
if cut_prefix:
lemma = lemma[cut_prefix:]
if cut:
lemma = lemma[:-cut]
lemma += suffix
# failsafe
if not lemma:
return token
if case == UPPERCASE:
lemma = lemma[0].upper() + lemma[1:]
return lemma
def correct_lemma(token, lemma, tag, morfeusz):
match = [interp[2] for interp in morfeusz.analyse(token) if interp[2][0] == token and interp[2][2] == tag]
match_lemmas = set(interp[1].split(':')[0] if ':' not in interp[0] else interp[1] for interp in match)
if match_lemmas and lemma.lower() not in [l.lower() for l in match_lemmas]:
if len(match_lemmas) != 1:
print(token, lemma, tag, '->', sorted(match_lemmas))
print(' ---> >1 matching lemma, will take alphabetically first!')
return sorted(match_lemmas)[0]
return lemma
def normalize(chart):
N = len(chart)
norm = [max(1e-12, sum(chart[i][j] for j in range(N))) for i in range(N)]
normalized = [[chart[i][j] / norm[i] for j in range(N)] for i in range(N)]
return normalized
def add_root(chart):
N = len(chart)
chartr = [[0.0 for j in range(N + 1)] for i in range(N + 1)]
for i in range(N):
for j in range(N):
if i == j:
chartr[i + 1][0] = chart[i][i]
else:
chartr[i + 1][j + 1] = chart[i][j]
return chartr
def mst(chart):
edges = []
N = len(chart)
paths = {(i, i) for i in range(N)}
for i, row in enumerate(chart):
edges += [(weight, j, i) for j, weight in enumerate(row)]
edges = list(reversed(sorted(edges)))
tree = set()
while edges and len(tree) < N - 1:
w, i, j = edges[0]
if w == 0:
break
tree.add((i, j))
# there can be only one root!
if i == 0:
edges = [e for e in edges if e[1] != 0]
new_paths = {(i, j)}
for p1 in paths:
for p2 in paths:
if p1[1] == i and p2[0] == j:
new_path = (p1[0], p2[1])
new_paths.add(new_path)
paths.update(new_paths)
edges = [e for e in edges if e[2] != j and (e[2], e[1]) not in paths]
assert(len(tree) == N - 1)
return tree
def _do_mark_heads(tree, dependency_heads, deprels=None):
if not tree.children:
return tree.from_index
child_head_idx = [_do_mark_heads(child, dependency_heads, deprels=deprels) for child in tree.children]
heads = []
for child, child_head_id in zip(tree.children, child_head_idx):
if dependency_heads[child_head_id] not in child_head_idx:
child.is_head = True
heads.append(child_head_id)
elif deprels:
child.attributes['deprel'] = deprels[child_head_id]
assert(len(heads) == 1)
return heads[0]
def _mark_heads(tree, dependency_heads, deprels=None):
_do_mark_heads(tree, dependency_heads, deprels)
def _rearrange(tree):
if tree.children:
children = [_rearrange(child) for child in tree.children]
tree.children = sorted(children, key=lambda child: child.from_index)
tree.from_index = tree.children[0].from_index
tree.to_index = max(child.to_index for child in tree.children)
return tree
def tree_from_dataset_instance(instance, dataset_features, NER=False):
nonterminals = instance[NE_NONTERMINALS if NER else NONTERMINALS]
if nonterminals is None:
return None
nodes = []
# create a node for each nonterminal
for i, nonterminal in enumerate(nonterminals):
category = nonterminal['cat']
if category is None:
assert(len(nonterminal['children']) == 1)
token_idx = nonterminal['children'][0]
orth = instance[TOKENS][token_idx]
lemma = instance[LEMMAS][token_idx]
tag = dataset_features[TAGS].feature.int2str(instance[TAGS][token_idx])
category = (orth, lemma, tag)
nodes.append(TreeNode(i, category, False, token_idx, token_idx + 1))
else:
nodes.append(TreeNode(i, category, False, 0, 0))
# link the nodes with parent-head relations
for nonterminal, dupa in list(zip(nonterminals, nodes)):
if nonterminal['cat'] is not None:
for child_idx in nonterminal['children']:
dupa.add_child(nodes[child_idx])
tree = nodes[0]
# mark the heads according to dependency relations
deprels = None
if not NER:
deprels = [dataset_features[DEPRELS].feature.int2str(d) for d in instance[DEPRELS]]
_mark_heads(tree, instance[NE_HEADS if NER else HEADS], deprels=deprels)
return _rearrange(tree)
def get_heads(matrix, NER=False):
chart_n = normalize(matrix)
if NER:
# exchange ‘self-parent’ with ‘child of first token’ if ‘self-parent’ is larger
for i, row in enumerate(chart_n):
if row[i] > row[0]:
row[0], row[i] = row[i], row[0]
chart_r = add_root(chart_n)
try:
heads = {dep - 1: hd - 1 if hd > 0 else None for hd, dep in mst(chart_r) if dep > 0}
except:
print(matrix)
print(chart_n)
print(chart_r)
raise
return [hd for dep, hd in sorted(heads.items())]
def make_head_path(path, token, lemma, tag, index):
node = TreeNode(0, (token, lemma, tag), False, index, index + 1)
if path == EMPTY:
return node
for cat in reversed(path.split('_')):
node.is_head = True
node = TreeNode(0, cat, False, None, None, children=[node])
return node
def append_dependent(head_path, dep_path, anchor_cat, anchor_h, decompress=False):
problem = None
anchor_node = head_path
head_chain = [head_path]
while head_chain[-1].children:
heads = [child for child in head_chain[-1].children if child.is_head]
try:
assert len(heads) == 1
head_chain.append(heads[0])
except:
head_path.pretty_print()
head_chain[-1].pretty_print()
raise
matching_heads = [hd for hd in head_chain if hd.category == anchor_cat]
if not matching_heads:
anchor_node = head_path
problem = (dep_path, anchor_cat)
else:
# fallback: take the highest
if anchor_h is None:
anchor_h = len(matching_heads)
elif anchor_h > len(matching_heads) and not decompress:
anchor_h = len(matching_heads)
elif anchor_h > len(matching_heads) and decompress:
expand = anchor_h - len(matching_heads)
for i in range(expand):
child = matching_heads[0]
parent = child.parent
new_node = TreeNode(0, anchor_cat, child.is_head, None, None, children=[child], attributes=child.attributes)
child.is_head = True
child.attributes = {}
if parent:
parent.children.remove(child)
parent.add_child(new_node)
if head_path == child:
head_path = new_node
matching_heads.insert(0, new_node)
anchor_node = matching_heads[-anchor_h]
anchor_node.add_child(dep_path)
dep_path.is_head = False
return head_path, problem
POS2PRE = {
#'aglt' : 'aglt',
#'conj' : 'spójnik',
#'dig' : 'formalicz',
#'fin' : 'formaczas',
#'interp' : 'punct',
#'num' : 'formalicz',
#'praet' : 'formaczas',
#'_' : '???',
}
def add_dummy_pre(path):
pos = path.category[2].split(':')[0]
return TreeNode(0, f'{POS2PRE[pos]}', True, {}, [path])
def check_no_cycles(heads):
children_dict = defaultdict(set)
for i, hd in enumerate(heads):
children_dict[hd].add(i)
visited = {-1}
queue = [-1]
while queue:
children = children_dict.pop(queue[0], set())
if children.intersection(visited):
return False
visited.update(children)
queue = queue[1:] + list(children)
return not children
# find any <EMPTY>’s children and reattach them to <EMPTY>’s head
def try_reattach(heads, spines, tokens):
to_reattach = [i for i, spine in enumerate(spines) if spine == EMPTY and i in heads]
k = 0
while to_reattach:
k += 1
if k == 50:
1/0
print('------- TO REATTACH:')
for i in to_reattach:
print(' ===>', i, tokens[i], '->', [t for t, h in zip(tokens, heads) if h == i])
tr = to_reattach[0]
hd_idx = heads[tr]
assert(hd_idx is not None)
new_heads = heads.copy()
for i, hd in enumerate(heads):
if hd == tr:
new_heads[i] = hd_idx
if check_no_cycles(new_heads):
heads = new_heads
else:
print('can’t reattach (cycle!)')
1/0
to_reattach = [i for i, spine in enumerate(spines) if spine == EMPTY and i in heads]
return heads
def reconstruct_tree(tokens, tags, nonterminal_features, decompress=False, root_label=None, force_root_label=False, NER=False):
morph_tags = tags.get(TAGS, ['_' for _ in tokens])
lemmas = tags.get(LEMMAS, ['_' for _ in tokens])
heads = tags[HEADS if not NER else NE_HEADS]
deprels = tags[DEPRELS] if not NER else ['_' for _ in tokens]
spines = tags[SPINES if not NER else NE_SPINES]
anchors = tags[ANCHORS if not NER else NE_ANCHORS]
anchor_hs = tags[ANCHOR_HS if not NER else NE_ANCHOR_HS]
problems = []
spines = list(spines)
children = defaultdict(set)
if root_label is not None:
for i, (head, spine) in enumerate(zip(heads, spines)):
if (head is None and root_label not in spine):
if spines[i] == EMPTY:
spines[i] = root_label
elif force_root_label:
spines[i] = (f'{root_label}_' + spines[i]).replace(f'_{EMPTY}', '')
if (head is not None and root_label in spine):
assert(spines[i].startswith(root_label))
spines[i] = EMPTY if spines[i] == root_label else spines[i].replace(f'{root_label}_', '')
reattach = False
new_heads = try_reattach(heads, spines, tokens)
if new_heads != heads:
heads = new_heads
reattach = True
head_paths = [
make_head_path(p, tok, lemma, tag, i) for i, (p, tok, lemma, tag)
in enumerate(zip(spines, tokens, lemmas, morph_tags))
]
# if a spine is some other spine’s head and consists of a terminal only, add a dummy preterminal to append to
head_paths = [add_dummy_pre(hp) if (type(hp.category) == tuple and i in heads) else hp for i, hp in enumerate(head_paths)]
# add nonterminal features
for ntf in nonterminal_features:
for hp, feat in zip(head_paths, tags[ntf]):
hp.attributes[ntf] = feat
anchor_hs = [int(h) if h != '<ROOT>' else None for h in anchor_hs]
root = None
for i, head in enumerate(heads):
if deprels[i] is not None:
head_paths[i].attributes['deprel'] = deprels[i]
if head is None:
root = i
else:
head_paths[head], problem = append_dependent(
head_paths[head], head_paths[i], anchors[i], anchor_hs[i], decompress=decompress)
if problem:
problems.append(problem)
if reattach:
problems.append('reattach')
tree = _rearrange(head_paths[root])
return tree, problems
def make_tree(tokens, tags, nonterminal_features, root_label=None, force_root_label=False, decompress=True, NER=False):
tree, problems = reconstruct_tree(
tokens, tags, nonterminal_features,
root_label=root_label,
force_root_label=force_root_label,
decompress=decompress,
NER=NER,
)
return tree
def _node2dict(tree, replace_quotes):
children = [_node2dict(child, replace_quotes) for child in tree.children]
leaves = tree.get_yield()
node = {
'is_head' : tree.is_head,
'span' : {'from' : tree.from_index, 'to' : tree.to_index},
}
if tree.attributes:
node['attributes'] = tree.attributes.copy()
if 'deprel' in tree.attributes:
node['deprel'] = tree.attributes['deprel']
node['attributes'].pop('deprel')
if children:
node.update({
'category' : tree.category,
'children' : children,
})
else:
node.update(dict(zip(('orth', 'base', 'tag'), tree.category)))
if replace_quotes:
node['orth'] = node['orth'].replace('"', '”')
node['base'] = node['base'].replace('"', '”')
return node
def tree2dict(tree, metadata={}, replace_quotes=False):
return {'tree' : _node2dict(tree, replace_quotes), 'metadata' : metadata}