fix_files.py
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#!/usr/bin/env python
import sys
import os
import re
import shutil
from collections import defaultdict
from optparse import OptionParser
# Solution with no hard coded path would be welcome
sys.path.append(os.path.join(os.path.dirname(os.path.abspath(sys.argv[0])), ".."))
from dfs.database import Database
from dfs.repo import Repo
from dfs.config import Config
def fix_file(wc, db, file_id, contents, anno_per_file):
file_elem = db.file_index[file_id]
if file_elem is None:
print "File", file_id, "not found in database."
return False
ann_elem = None
idx = -1
for ann in file_elem.findall("ann") + file_elem.findall("s_ann"):
idx = idx + 1
if db.returned(ann):
ann_elem = ann
break
if ann_elem is None:
print "File", file_id, "not returned in database."
return False
print "Fixing file " + file_id
try:
db.fix(ann_elem)
if ann_elem.tag == "ann":
wc.upload(file_id, idx, contents)
elif ann_elem.tag == "s_ann":
wc.upload_prim(file_id, contents)
except Exception as ex:
print "\t error: " + str(ex)
wc.revert()
return False
return True
def match_ext(path, exts):
for ext in exts:
if path.endswith(ext):
return ext
def path_id(path, ext):
_, filename = os.path.split(path)
return re.sub("%s$" % ext, "", filename)
def group_paths(paths, exts):
result = defaultdict(list)
for path in paths:
ext = match_ext(path, exts)
if (ext != None):
file_id = path_id(path, ext)
if file_id not in result:
result[file_id] = {}
with open(path, "r") as f:
result[file_id][ext]=f.read()
return result
def get_rec_paths(paths):
result = []
for path in paths:
if os.path.isdir(path):
for dirname, dirnames, filenames in os.walk(path):
for filename in filenames:
result.append(os.path.join(dirname, filename))
else:
result.append(path)
return result
if __name__ == "__main__":
optparser = OptionParser(usage="""usage: %prog [options] CONFIG FILES""")
optparser.add_option("--extensions", dest="exts", default=".mmax,_mentions.xml,_words.xml",
help="List of comma-separated file extensions")
(options, args) = optparser.parse_args()
if len(args) < 2:
optparser.print_help()
sys.exit(0)
conf_path = args[0]
cfg = Config(conf_path)
anno_per_file = int(cfg["anno_per_file"])
paths = get_rec_paths(args[1:])
exts = options.exts.split(",")
files = group_paths(paths, exts)
wc = Repo(cfg["svn.repository"], cfg["svn.login"], cfg["svn.passwd"])
db = Database(wc.db_path(), anno_per_file)
success = []
fail = []
for file_id, contents in files.iteritems():
if fix_file(wc, db, file_id, contents, anno_per_file):
success.append(file_id)
else:
fail.append(file_id)
db.save()
wc.commit("Fixed files: " + str(success))
print ""
if len(success) > 0:
print "Fixed files: " + str(success)
if len(fail) > 0:
print "Failed to fix files: " + str(fail)